Building an Automated Research Workflow
- March 24, 2026
- Tutorial
Introduction This tutorial documents the technical innovations and hard-won solutions behind an automated research workflow. This is not a theoretical “how to organize agents” guide—it’s practical documentation of real problems encountered in building a 9-stage automated research pipeline that takes you from a research idea to a completed paper.
Read MoreResearch Workflow Automation System
- March 24, 2026
- Course project
Overview Academic research involves repetitive, time-consuming tasks: data cleaning, literature searches, statistical analysis, figure generation, and writing. This system automates the entire research pipeline—from data to final PDF—with a single prompt and zero human intervention.
Read MorePDAC Spatial Transcriptomics Analysis
- May 1, 2023
- Research
Overview Analyzed the intersection of nerves and tumor cells in Pancreatic Ductal Adenocarcinoma (PDAC) to understand how the microenvironment facilitates perineural invasion.
Read MorePrognostic Marker Discovery Pipeline
- May 1, 2023
- Research
Overview Developed a semi-automated pipeline to standardize heterogeneous public single-cell datasets, enabling the discovery of prognostic markers across multiple tissue types.
Read More